PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0008s0086.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 272aa    MW: 29320.9 Da    PI: 6.7971
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0008s0086.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.14e-331670155
              G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+ Lt++hvkSHLQkYRl
  Kalax.0008s0086.1.p 16 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRAMGVEELTIYHVKSHLQKYRL 70
                         79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.8461373IPR017930Myb domain
SuperFamilySSF466891.97E-171470IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-321471IPR009057Homeodomain-like
TIGRFAMsTIGR015571.0E-251671IPR006447Myb domain, plants
PfamPF002491.0E-81869IPR001005SANT/Myb domain
PfamPF143792.4E-23101147IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MDRPGGGKNS PSVSSKQRLR WTHELHERFV DAVAQLGGPD RATPKGVLRA MGVEELTIYH  60
VKSHLQKYRL AKYLPDSSDG NKVDKKESGD PHSGLEDSSG MQISEALKLQ MEVQKRLHEQ  120
LEVQRQLQLR IEAQGKYLKK IIEEQQRLSG VLAGSSASDC LSGGLDCDKI DPPTPAPTSE  180
LPLQEKSPKD AAPVKSLSLD ESLSSPNEPP TPDSGCNANS PLSSPQNERS TKKQQVNKDA  240
PSAMPPGMGI SHHILESSDG GLSSAQFGHP L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006449962.11e-122hypothetical protein CICLE_v10015893mg
SwissprotQ8GUN53e-47PHL1_ARATH; Protein PHR1-LIKE 1
TrEMBLV4UB201e-122V4UB20_9R
STRINGVIT_00s0475g00040.t011e-120(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-100G2-like family protein